A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv460881



Internal ID15520946
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:146794966..146851250hg38UCSC Ensembl
Innerchr3:146512753..146569037hg19UCSC Ensembl
Innerchr3:147995443..148051727hg18UCSC Ensembl
Innerchr3:147995451..148051735hg17UCSC Ensembl
Cytoband3q24
Allele length
AssemblyAllele length
hg3856285
hg1956285
hg1856285
hg1756285
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv537366
SamplesHGDP00963
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv460881
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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