A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv460880



Internal ID15520945
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:145604180..145673313hg38UCSC Ensembl
Innerchr3:145321967..145391100hg19UCSC Ensembl
Innerchr3:146804657..146873790hg18UCSC Ensembl
Innerchr3:146804665..146873798hg17UCSC Ensembl
Cytoband3q24
Allele length
AssemblyAllele length
hg3869134
hg1969134
hg1869134
hg1769134
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv537365
Samples1780854491_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv460880
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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