A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv460803



Internal ID15520868
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:103805473..103869582hg38UCSC Ensembl
Innerchr3:103524317..103588426hg19UCSC Ensembl
Innerchr3:105007007..105071116hg18UCSC Ensembl
Innerchr3:105007007..105071116hg17UCSC Ensembl
Cytoband3q13.11
Allele length
AssemblyAllele length
hg3864110
hg1964110
hg1864110
hg1764110
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv537307
SamplesNINDS_162
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv460803
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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