A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv460510



Internal ID15520575
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:39951483..39991467hg38UCSC Ensembl
Innerchr3:39992974..40032958hg19UCSC Ensembl
Innerchr3:39967978..40007962hg18UCSC Ensembl
Innerchr3:39967978..40007962hg17UCSC Ensembl
Cytoband3p22.1
Allele length
AssemblyAllele length
hg3839985
hg1939985
hg1839985
hg1739985
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv537069
SamplesHGDP01321
Known GenesMYRIP
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv460510
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer