A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv460453



Internal ID15520518
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:15651452..15733318hg38UCSC Ensembl
Innerchr3:15692959..15774825hg19UCSC Ensembl
Innerchr3:15667963..15749829hg18UCSC Ensembl
Innerchr3:15667963..15749829hg17UCSC Ensembl
Cytoband3p24.3
Allele length
AssemblyAllele length
hg3881867
hg1981867
hg1881867
hg1781867
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv537021
Samples1780862226_A
Known GenesANKRD28
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv460453
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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