A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv460415



Internal ID15520480
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:8784337..8840029hg38UCSC Ensembl
Innerchr3:8826023..8881713hg19UCSC Ensembl
Innerchr3:8801023..8856713hg18UCSC Ensembl
Innerchr3:8801023..8856713hg17UCSC Ensembl
Cytoband3p25.3
Allele length
AssemblyAllele length
hg3855693
hg1955691
hg1855691
hg1755691
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv536996
Samples1798860084_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv460415
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer