A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv459705



Internal ID15519770
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:25254439..25512474hg38UCSC Ensembl
Innerchr22:25650406..25908441hg19UCSC Ensembl
Innerchr22:23980406..24238441hg18UCSC Ensembl
Innerchr22:23974960..24232995hg17UCSC Ensembl
Cytoband22q11.23
Allele length
AssemblyAllele length
hg38258036
hg19258036
hg18258036
hg17258036
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv576n27
Supporting Variantsnssv536423
SamplesNINDS_203
Known GenesCRYBB2P1, IGLL3P, LRP5L, MIR6817
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv459705
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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