Internal ID | 15172675 |
Landmark | |
Location Information | |
Cytoband | 2q21.1 |
Allele length | Assembly | Allele length | hg38 | 159026 | hg19 | 159026 | hg18 | 159026 | hg17 | 159026 |
|
Variant Type | CNV gain |
Copy Number | |
Allele State | |
Allele Origin | |
Probe Count | |
Validation Flag | |
Merged Status | M |
Merged Variants | dgv475n27 |
Supporting Variants | nssv536073 |
Samples | HGDP00716 |
Known Genes | CCDC115, IMP4, MZT2B, TUBA3E |
Method | SNP array |
Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. |
Platform | Not reported |
Comments | |
Reference | Itsara_et_al_2009 |
Pubmed ID | 19166990 |
Accession Number(s) | nsv459296
|
Frequency | Sample Size | 1557 | Observed Gain | 1 | Observed Loss | 0 | Observed Complex | 0 | Frequency | n/a |
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