Internal ID | 15172465 |
Landmark | |
Location Information | |
Cytoband | 20q13.33 |
Allele length | Assembly | Allele length | hg38 | 36901 | hg19 | 36901 | hg18 | 36901 | hg17 | 36901 |
|
Variant Type | CNV loss |
Copy Number | |
Allele State | |
Allele Origin | |
Probe Count | |
Validation Flag | |
Merged Status | M |
Merged Variants | dgv523n27 |
Supporting Variants | nssv535920 |
Samples | HGDP00655 |
Known Genes | SLC2A4RG, ZBTB46 |
Method | SNP array |
Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. |
Platform | Not reported |
Comments | |
Reference | Itsara_et_al_2009 |
Pubmed ID | 19166990 |
Accession Number(s) | nsv459086
|
Frequency | Sample Size | 1557 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
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