A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4576437



Internal ID19959626
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:58688244..58688245hg38UCSC Ensembl
chr18:56355476..56355477hg19UCSC Ensembl
Cytoband18q21.32
Allele length
AssemblyAllele length
hg381185
hg191185
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16021040
Samples
Known GenesMALT1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4576437
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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