A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457611



Internal ID15517676
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:85214718..85270519hg38UCSC Ensembl
Innerchr16:85248324..85304125hg19UCSC Ensembl
Innerchr16:83805825..83861626hg18UCSC Ensembl
Innerchr16:83805825..83861626hg17UCSC Ensembl
Cytoband16q24.1
Allele length
AssemblyAllele length
hg3855802
hg1955802
hg1855802
hg1755802
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534757
SamplesHGDP00685
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457611
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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