A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457276



Internal ID15517341
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:97666007..97705293hg38UCSC Ensembl
Innerchr15:98209237..98248523hg19UCSC Ensembl
Innerchr15:96010241..96049527hg18UCSC Ensembl
Innerchr15:96010241..96049527hg17UCSC Ensembl
Cytoband15q26.2
Allele length
AssemblyAllele length
hg3839287
hg1939287
hg1839287
hg1739287
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534503
SamplesHGDP00956
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457276
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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