A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457275



Internal ID15517340
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:97536805..97599419hg38UCSC Ensembl
Innerchr15:98080035..98142649hg19UCSC Ensembl
Innerchr15:95881039..95943653hg18UCSC Ensembl
Innerchr15:95881039..95943653hg17UCSC Ensembl
Cytoband15q26.2
Allele length
AssemblyAllele length
hg3862615
hg1962615
hg1862615
hg1762615
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv331n27
Supporting Variantsnssv534502
SamplesHGDP00684
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457275
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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