A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457266



Internal ID15517331
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:95720753..95806697hg38UCSC Ensembl
Innerchr15:96263982..96349926hg19UCSC Ensembl
Innerchr15:94064986..94150930hg18UCSC Ensembl
Innerchr15:94064986..94150930hg17UCSC Ensembl
Cytoband15q26.2
Allele length
AssemblyAllele length
hg3885945
hg1985945
hg1885945
hg1785945
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534493
Samples1782681093_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457266
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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