A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457255



Internal ID15517320
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:93193645..93215984hg38UCSC Ensembl
Innerchr15:93736874..93759213hg19UCSC Ensembl
Innerchr15:91537878..91560217hg18UCSC Ensembl
Innerchr15:91537878..91560217hg17UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg3822340
hg1922340
hg1822340
hg1722340
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv327n27
Supporting Variantsnssv534484
SamplesHGDP01220
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457255
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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