A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457254



Internal ID15517319
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:93191753..93253049hg38UCSC Ensembl
Innerchr15:93734982..93796278hg19UCSC Ensembl
Innerchr15:91535986..91597282hg18UCSC Ensembl
Innerchr15:91535986..91597282hg17UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg3861297
hg1961297
hg1861297
hg1761297
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534483
SamplesNINDS_219
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457254
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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