A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457249



Internal ID15170628
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:92573289..92590195hg38UCSC Ensembl
Innerchr15:93116519..93133425hg19UCSC Ensembl
Innerchr15:90917523..90934429hg18UCSC Ensembl
Innerchr15:90917523..90934429hg17UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg3816907
hg1916907
hg1816907
hg1716907
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534479
SamplesHGDP00902
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457249
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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