A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457234



Internal ID15517299
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:87256693..87320484hg38UCSC Ensembl
Innerchr15:87799924..87863715hg19UCSC Ensembl
Innerchr15:85600928..85664719hg18UCSC Ensembl
Innerchr15:85600928..85664719hg17UCSC Ensembl
Cytoband15q25.3
Allele length
AssemblyAllele length
hg3863792
hg1963792
hg1863792
hg1763792
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv324n27
Supporting Variantsnssv534467
SamplesNINDS_258
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457234
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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