A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457192



Internal ID15517257
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:70241093..70305902hg38UCSC Ensembl
Innerchr15:70533432..70598241hg19UCSC Ensembl
Innerchr15:68320486..68385295hg18UCSC Ensembl
Innerchr15:68320486..68385295hg17UCSC Ensembl
Cytoband15q23
Allele length
AssemblyAllele length
hg3864810
hg1964810
hg1864810
hg1764810
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534434
SamplesHGDP01094
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457192
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer