A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457156



Internal ID15517221
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:55108451..55173957hg38UCSC Ensembl
Innerchr15:55400649..55466155hg19UCSC Ensembl
Innerchr15:53187941..53253447hg18UCSC Ensembl
Innerchr15:53187941..53253447hg17UCSC Ensembl
Cytoband15q21.3
Allele length
AssemblyAllele length
hg3865507
hg1965507
hg1865507
hg1765507
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534410
SamplesNINDS_242
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457156
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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