A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv457114



Internal ID15517179
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:37258871..37274560hg38UCSC Ensembl
Innerchr15:37551072..37566761hg19UCSC Ensembl
Innerchr15:35338364..35354053hg18UCSC Ensembl
Innerchr15:35338364..35354053hg17UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg3815690
hg1915690
hg1815690
hg1715690
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534376
SamplesHGDP00929
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv457114
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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