A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv456733



Internal ID15516798
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:26313896..26391525hg38UCSC Ensembl
Innerchr15:26559043..26636672hg19UCSC Ensembl
Innerchr15:24110136..24187765hg18UCSC Ensembl
Innerchr15:24110136..24187765hg17UCSC Ensembl
Cytoband15q12
Allele length
AssemblyAllele length
hg3877630
hg1977630
hg1877630
hg1777630
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv534025
SamplesHGDP01187
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv456733
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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