A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4565329



Internal ID20295217
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:155796003..155796578hg38UCSC Ensembl
chr4:156717155..156717730hg19UCSC Ensembl
Cytoband4q32.1
Allele length
AssemblyAllele length
hg38576
hg19576
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15790350
Samples
Known GenesGUCY1B3
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4565329
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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