A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4565249



Internal ID20295137
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:133926625..133928269hg38UCSC Ensembl
chr3:133645469..133647113hg19UCSC Ensembl
Cytoband3q22.1
Allele length
AssemblyAllele length
hg381645
hg191645
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15789901
Samples
Known GenesC3orf36
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4565249
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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