A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4565215



Internal ID20295103
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:6894747..6894748hg38UCSC Ensembl
chr17:6798066..6798067hg19UCSC Ensembl
Cytoband17p13.1
Allele length
AssemblyAllele length
hg3899
hg1999
Variant TypeCNV line1 insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16016412
Samples
Known GenesALOX12P2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4565215
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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