A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4564802



Internal ID20294690
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:17943842..17943843hg38UCSC Ensembl
chr4:17945465..17945466hg19UCSC Ensembl
Cytoband4p15.31
Allele length
AssemblyAllele length
hg38694
hg19694
Variant TypeCNV line1 insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16050877
Samples
Known GenesLCORL
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4564802
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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