A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4564106



Internal ID19947310
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:11110056..11110057hg38UCSC Ensembl
chr1:11170113..11170114hg19UCSC Ensembl
Cytoband1p36.22
Allele length
AssemblyAllele length
hg38290
hg19290
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16024415
Samples
Known GenesMTOR
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4564106
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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