A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4564031



Internal ID19947235
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:138775842..138775843hg38UCSC Ensembl
chr6:139096979..139096980hg19UCSC Ensembl
Cytoband6q24.1
Allele length
AssemblyAllele length
hg38456
hg19456
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16070431
Samples
Known GenesCCDC28A
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4564031
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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