A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4563866



Internal ID20293758
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:17696783..17696784hg38UCSC Ensembl
chr6:17697014..17697015hg19UCSC Ensembl
Cytoband6p22.3
Allele length
AssemblyAllele length
hg38458
hg19458
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16065960
Samples
Known GenesNUP153
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4563866
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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