A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4562370



Internal ID19945572
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:46587836..46587837hg38UCSC Ensembl
chrX:46447271..46447272hg19UCSC Ensembl
CytobandXp11.23
Allele length
AssemblyAllele length
hg38128
hg19128
Variant TypeCNV sva insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16089613
Samples
Known GenesCHST7
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4562370
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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