A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv455901



Internal ID15515966
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr13:58135777..58189468hg38UCSC Ensembl
Innerchr13:58709911..58763602hg19UCSC Ensembl
Innerchr13:57607912..57661603hg18UCSC Ensembl
Innerchr13:57607912..57661603hg17UCSC Ensembl
Cytoband13q21.1
Allele length
AssemblyAllele length
hg3853692
hg1953692
hg1853692
hg1753692
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv226n27
Supporting Variantsnssv533356
SamplesHGDP01095
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv455901
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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