A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4557968



Internal ID19941160
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:43768609..43768610hg38UCSC Ensembl
chr12:44162412..44162413hg19UCSC Ensembl
Cytoband12q12
Allele length
AssemblyAllele length
hg383012
hg193012
Variant TypeCNV line1 insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16001658
Samples
Known GenesIRAK4
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4557968
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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