A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4532458



Internal ID20262577
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:20551686..20698687hg38UCSC Ensembl
chr17:20454999..20602000hg19UCSC Ensembl
Cytoband17p11.2
Allele length
AssemblyAllele length
hg38147002
hg19147002
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15958159
Samples
Known GenesCDRT15L2
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4532458
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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