A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4531936



Internal ID20262055
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:44963288..44963794hg38UCSC Ensembl
chr17:43040656..43041162hg19UCSC Ensembl
Cytoband17q21.31
Allele length
AssemblyAllele length
hg38507
hg19507
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15959534
Samples
Known GenesC1QL1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4531936
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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