A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4521030



Internal ID19904460
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:4436208..4436608hg38UCSC Ensembl
chr4:4437935..4438335hg19UCSC Ensembl
Cytoband4p16.3
Allele length
AssemblyAllele length
hg38401
hg19401
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15974011
Samples
Known GenesSTX18
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4521030
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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