A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4518054



Internal ID20248173
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:88705598..88807999hg38UCSC Ensembl
chrX:87960599..88063000hg19UCSC Ensembl
CytobandXq21.31
Allele length
AssemblyAllele length
hg38102402
hg19102402
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15990266
Samples
Known GenesCPXCR1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4518054
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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