A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4504815



Internal ID19888207
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:49660040..49660041hg38UCSC Ensembl
chr17:47737402..47737403hg19UCSC Ensembl
Cytoband17q21.33
Allele length
AssemblyAllele length
hg38104
hg19104
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16017434
Samples
Known GenesSPOP
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4504815
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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