A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4496946



Internal ID20226998
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:73288075..73288076hg38UCSC Ensembl
chr6:73997798..73997799hg19UCSC Ensembl
Cytoband6q13
Allele length
AssemblyAllele length
hg38200
hg19200
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16068350
Samples
Known GenesC6orf147, KHDC1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID32461652
Accession Number(s)nsv4496946
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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