A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4496264



Internal ID19879624
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:80629433..80629434hg38UCSC Ensembl
chr5:79925252..79925253hg19UCSC Ensembl
Cytoband5q14.1
Allele length
AssemblyAllele length
hg3879
hg1979
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16063473
Samples
Known GenesDHFR
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Comments
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4496264
Frequency
Sample Size10847
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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