A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv438390



Internal ID15388200
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:15350387..15356540hg38UCSC Ensembl
Innerchr3:15391894..15398047hg19UCSC Ensembl
Innerchr3:15366898..15373051hg18UCSC Ensembl
Innerchr3:15366898..15373051hg16UCSC Ensembl
Cytoband3p24.3
Allele length
AssemblyAllele length
hg386154
hg196154
hg186154
hg166154
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv471229, nssv471228, nssv471230
SamplesNA18582, NA18966, NA18990
Known Genes
MethodSNP array
AnalysisNull genotypes - for each genotype assay and population sample we defined the null genotype pattern of that assay as the binary vector (length 90) of null genotype calls across the 90 individuals.
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nsv438390
Frequency
Sample Size269
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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