A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv438236



Internal ID15388047
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:112718618..112735757hg38UCSC Ensembl
Innerchr12:113156423..113173562hg19UCSC Ensembl
Innerchr12:111640806..111657945hg18UCSC Ensembl
Innerchr12:111568376..111585515hg16UCSC Ensembl
Cytoband12q24.13
Allele length
AssemblyAllele length
hg3817140
hg1917140
hg1817140
hg1617140
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv470550, nssv470549
SamplesNA18508, NA18506
Known Genes
MethodSNP array
AnalysisMendelian inconsistencies - for each genotype assay and population sample we defined the Mendel failure pattern of that assay as the binary vector (length 60) of Mendel consistency status across the 60 parent-offspring pair.
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nsv438236
Frequency
Sample Size269
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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