Internal ID | 15041426 |
Landmark | |
Location Information | |
Cytoband | 12p12.2 |
Allele length | Assembly | Allele length | hg38 | 95263 | hg19 | 95263 | hg18 | 95263 | hg16 | 95263 |
|
Variant Type | CNV loss |
Copy Number | |
Allele State | |
Allele Origin | |
Probe Count | |
Validation Flag | |
Merged Status | M |
Merged Variants | |
Supporting Variants | nssv470380, nssv470381, nssv470379 |
Samples | NA19007, NA18594 |
Known Genes | SLCO1B3 |
Method | SNP array |
Analysis | Hardy-Weinberg disequilibrium - we looked for genomic regions in which hetobs/hetexp consistency fell below some cutoff (we used cutoffs of 0.7 and 0.4). Null genotypes - for each genotype assay and population sample we defined the null genotype pattern of that assay as the binary vector (length 90) of null genotype calls across the 90 individuals. |
Platform | Not reported |
Comments | |
Reference | McCarroll_et_al_2006 |
Pubmed ID | 16468122 |
Accession Number(s) | nsv438195
|
Frequency | Sample Size | 269 | Observed Gain | 0 | Observed Loss | 2 | Observed Complex | 0 | Frequency | n/a |
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