Internal ID | 15041425 |
Landmark | |
Location Information | |
Cytoband | 12p12.3 |
Allele length | Assembly | Allele length | hg38 | 87165 | hg19 | 87165 | hg18 | 87165 | hg16 | 87165 |
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Variant Type | CNV loss |
Copy Number | |
Allele State | |
Allele Origin | |
Probe Count | |
Validation Flag | |
Merged Status | M |
Merged Variants | |
Supporting Variants | nssv470378, nssv470373, nssv470377, nssv470376, nssv470375 |
Samples | NA19137, NA19159, NA19161, NA19139 |
Known Genes | PIK3C2G |
Method | SNP array |
Analysis | Hardy-Weinberg disequilibrium - we looked for genomic regions in which hetobs/hetexp consistency fell below some cutoff (we used cutoffs of 0.7 and 0.4). Mendelian inconsistencies - for each genotype assay and population sample we defined the Mendel failure pattern of that assay as the binary vector (length 60) of Mendel consistency status across the 60 parent-offspring pair. |
Platform | Not reported |
Comments | |
Reference | McCarroll_et_al_2006 |
Pubmed ID | 16468122 |
Accession Number(s) | nsv438194
|
Frequency | Sample Size | 269 | Observed Gain | 0 | Observed Loss | 4 | Observed Complex | 0 | Frequency | n/a |
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