Variant Details

Variant: nsv438185

Internal ID

15041416

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr11:55604331..55606227	hg38	UCSC Ensembl
Inner	chr11:55371807..55373703	hg19	UCSC Ensembl
Inner	chr11:55128383..55130279	hg18	UCSC Ensembl
Inner	chr11:55147167..55149063	hg16	UCSC Ensembl

Cytoband

11q11

Allele length

Assembly	Allele length
hg38	1897
hg19	1897
hg18	1897
hg16	1897

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv470331, nssv470332, nssv470333, nssv470334

Samples

NA12003, NA12864, NA12763, NA11832

Known Genes

OR4C11

Method

SNP array

Analysis

Null genotypes - for each genotype assay and population sample we defined the null genotype pattern of that assay as the binary vector (length 90) of null genotype calls across the 90 individuals.

Platform

Not reported

Comments

Reference

McCarroll_et_al_2006

Pubmed ID

16468122

Accession Number(s)

nsv438185

Frequency

Sample Size	269
Observed Gain	0
Observed Loss	4
Observed Complex	0
Frequency	n/a