A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv437989



Internal ID15387800
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:90181213..90182984hg38UCSC Ensembl
Innerchr7:89810527..89812298hg19UCSC Ensembl
Innerchr7:89648463..89650234hg18UCSC Ensembl
Innerchr7:89422556..89424327hg16UCSC Ensembl
Cytoband7q21.13
Allele length
AssemblyAllele length
hg381772
hg191772
hg181772
hg161772
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv468932, nssv468916, nssv468939, nssv468953, nssv468926, nssv468947, nssv468924, nssv468925, nssv468949, nssv468948, nssv468931, nssv468917, nssv468921, nssv468936, nssv468920, nssv468951, nssv468943, nssv468929, nssv468935, nssv468944, nssv468954, nssv468937, nssv468933, nssv468940, nssv468922, nssv468928, nssv468950, nssv468923, nssv468942, nssv468934, nssv468955, nssv468945, nssv468918, nssv468938, nssv468946, nssv468927
SamplesNA12717, NA11830, NA10851, NA12801, NA12865, NA10857, NA12813, NA12812, NA19131, NA12044, NA19207, NA19128, NA12815, NA12760, NA12753, NA18503, NA12056, NA12145, NA12707, NA07345, NA06985, NA18523, NA10856, NA12043, NA18914, NA12716, NA12864, NA12057, NA10861, NA12874, NA07348, NA12740, NA19116, NA19129, NA19139, NA07000
Known Genes
MethodSNP array
AnalysisNull genotypes - for each genotype assay and population sample we defined the null genotype pattern of that assay as the binary vector (length 90) of null genotype calls across the 90 individuals.
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nsv437989
Frequency
Sample Size269
Observed Gain0
Observed Loss36
Observed Complex0
Frequencyn/a


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