A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv437902



Internal ID15041133
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:189646305..189649860hg38UCSC Ensembl
Innerchr3:189364094..189367649hg19UCSC Ensembl
Innerchr3:190846788..190850343hg18UCSC Ensembl
Innerchr3:190685007..190688562hg16UCSC Ensembl
Cytoband3q28
Allele length
AssemblyAllele length
hg383556
hg193556
hg183556
hg163556
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv467893, nssv467889, nssv467892, nssv467891, nssv467884, nssv467890, nssv467885, nssv467888, nssv467887
SamplesNA18504, NA18944, NA18547, NA18949, NA18503, NA18570, NA19211, NA18609, NA18612
Known GenesTP63
MethodSNP array
AnalysisNull genotypes - for each genotype assay and population sample we defined the null genotype pattern of that assay as the binary vector (length 90) of null genotype calls across the 90 individuals.
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nsv437902
Frequency
Sample Size269
Observed Gain0
Observed Loss9
Observed Complex0
Frequencyn/a


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