A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv437890



Internal ID15041121
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:159056551..159074497hg38UCSC Ensembl
Innerchr3:158774340..158792286hg19UCSC Ensembl
Innerchr3:160257034..160274980hg18UCSC Ensembl
Innerchr3:160095253..160113199hg16UCSC Ensembl
Cytoband3q25.32
Allele length
AssemblyAllele length
hg3817947
hg1917947
hg1817947
hg1617947
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv471426
SamplesNA07348
Known GenesIQCJ, IQCJ-SCHIP1
MethodSNP array
AnalysisNull genotypes - for each genotype assay and population sample we defined the null genotype pattern of that assay as the binary vector (length 90) of null genotype calls across the 90 individuals.
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nsv437890
Frequency
Sample Size269
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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