A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv437889



Internal ID15388239
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:155462385..155467261hg38UCSC Ensembl
Innerchr3:155180174..155185050hg19UCSC Ensembl
Innerchr3:156662868..156667744hg18UCSC Ensembl
Innerchr3:156501087..156505963hg16UCSC Ensembl
Cytoband3q25.31
Allele length
AssemblyAllele length
hg384877
hg194877
hg184877
hg164877
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv471420, nssv471419, nssv471425, nssv471418, nssv471414, nssv471417, nssv471421, nssv471411, nssv471416, nssv471415, nssv471422, nssv471413
SamplesNA18870, NA19137, NA19200, NA19161, NA18515, NA18516, NA19208, NA19202, NA19160, NA19206, NA18872, NA19139
Known Genes
MethodSNP array
AnalysisMendelian inconsistencies - for each genotype assay and population sample we defined the Mendel failure pattern of that assay as the binary vector (length 60) of Mendel consistency status across the 60 parent-offspring pair.
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nsv437889
Frequency
Sample Size269
Observed Gain0
Observed Loss12
Observed Complex0
Frequencyn/a


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