A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4345633



Internal ID19841591
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:159970420..159974724hg38UCSC Ensembl
chr6:160391452..160395756hg19UCSC Ensembl
Cytoband6q25.3
Allele length
AssemblyAllele length
hg384305
hg194305
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15790961
Samples
Known GenesIGF2R
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4345633
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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