A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv4344859



Internal ID19841439
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:74994349..75324890hg38UCSC Ensembl
chr10:76754107..77084648hg19UCSC Ensembl
Cytoband10q22.2
Allele length
AssemblyAllele length
hg38330542
hg19330542
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv15787401
Samples
Known GenesCOMTD1, DUPD1, DUSP13, KAT6B, SAMD8, VDAC2, ZNF503-AS1
MethodSequencing
AnalysisSV calls were generated using multi-algorithm consensus pipeline involving raw evidence assessment, filtering, clustering, genotyping, alternative allele structure resolution, and gene annotation. These methods are described in detail in the gnomAD-SV preprint [Collins*, Brand*, et al., bioRxiv (2019)|https://www.biorxiv.org/content/10.1101/578674v1], and are largely based on methods developed in [Werling et al., Nat. Genet. (2018)|https://www.ncbi.nlm.nih.gov/pubmed/29700473].
Platform
Commentscomplex variant
ReferencegnomAD_Structural_Variants
Pubmed ID12345678
Accession Number(s)nsv4344859
Frequency
Sample Size10847
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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